Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (B1IUY2)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (B1IUY2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1IUY2
- Type
- protein
- Length
- 876 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- Alanine--tRNA ligase
- UniProt
- B1IUY2
- Pockets
- 8 · best druggability 0.79
Structure
1 distinct chain · 41% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 876 | 41% helix, 27% strand | B1IUY2 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 892 | 0.79 | 0.81 | 105 | empty |
| 2 | 488 | 0.70 | 0.80 | 44 | empty |
| 3 | 190 | 0.48 | 0.76 | 29 | empty |
| 4 | 58 | 0.39 | 0.81 | 13 | empty |
| 5 | 57 | 0.36 | 0.79 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1IUY2
- Elsewhere: UniProt B1IUY2 · AlphaFold DB B1IUY2
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