Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q11V49)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q11V49) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q11V49
- Type
- protein
- Length
- 877 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2B01296Bb57621369D4Ca3C850f48DCF95a4d2d9
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q11V49
- Pockets
- 7 · best druggability 0.77
Structure
1 distinct chain · 43% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 877 | 43% helix, 26% strand | Q11V49 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 664 | 0.77 | 0.83 | 78 | empty |
| 2 | 484 | 0.72 | 0.82 | 46 | empty |
| 3 | 387 | 0.69 | 0.81 | 48 | empty |
| 4 | 119 | 0.50 | 0.80 | 17 | empty |
| 5 | 112 | 0.47 | 0.79 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q11V49
- Elsewhere: UniProt Q11V49 · AlphaFold DB Q11V49
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