Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q8NQ22)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q8NQ22) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8NQ22
- Type
- protein
- Length
- 888 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb3c0C983Fc44934AC589D7131C08a72544EBB92E
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q8NQ22
- Pockets
- 8 · best druggability 0.72
Structure
1 distinct chain · 44% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 888 | 44% helix, 27% strand | Q8NQ22 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 542 | 0.72 | 0.80 | 55 | empty |
| 2 | 232 | 0.63 | 0.82 | 36 | empty |
| 3 | 257 | 0.61 | 0.80 | 34 | empty |
| 4 | 286 | 0.60 | 0.79 | 42 | empty |
| 5 | 125 | 0.50 | 0.80 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8NQ22
- Elsewhere: UniProt Q8NQ22 · AlphaFold DB Q8NQ22
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