Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A4QEK7)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (A4QEK7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4QEK7
- Type
- protein
- Length
- 888 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd91633319BDB0a92cbC4f08DeA734Bf74C030064
- Molecule
- Alanine--tRNA ligase
- UniProt
- A4QEK7
- Pockets
- 7 · best druggability 0.71
Structure
1 distinct chain · 43% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 888 | 43% helix, 27% strand | A4QEK7 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 504 | 0.71 | 0.80 | 62 | empty |
| 2 | 490 | 0.69 | 0.80 | 51 | empty |
| 3 | 241 | 0.65 | 0.82 | 36 | empty |
| 4 | 195 | 0.56 | 0.80 | 27 | empty |
| 5 | 126 | 0.46 | 0.78 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4QEK7
- Elsewhere: UniProt A4QEK7 · AlphaFold DB A4QEK7
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