Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (B0SZN4)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (B0SZN4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B0SZN4
- Type
- protein
- Length
- 883 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x883C20F15F12833b6C5517ea6E586FFca13021dB
- Molecule
- Alanine--tRNA ligase
- UniProt
- B0SZN4
- Pockets
- 6 · best druggability 0.70
Structure
1 distinct chain · 41% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 883 | 41% helix, 26% strand | B0SZN4 |
Pockets
6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 491 | 0.70 | 0.80 | 51 | empty |
| 2 | 488 | 0.66 | 0.78 | 57 | empty |
| 3 | 593 | 0.64 | 0.75 | 67 | empty |
| 4 | 204 | 0.51 | 0.77 | 34 | empty |
| 5 | 69 | 0.41 | 0.80 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0SZN4
- Elsewhere: UniProt B0SZN4 · AlphaFold DB B0SZN4
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