Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q8RAH4)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q8RAH4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8RAH4
- Type
- protein
- Length
- 878 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x149591A8f137f962b0F00D67fDF8919Fa48b8be4
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q8RAH4
- Pockets
- 8 · best druggability 0.69
Structure
1 distinct chain · 44% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 878 | 44% helix, 26% strand | Q8RAH4 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 502 | 0.69 | 0.79 | 54 | empty |
| 2 | 235 | 0.53 | 0.76 | 31 | empty |
| 3 | 308 | 0.52 | 0.74 | 31 | empty |
| 4 | 96 | 0.46 | 0.80 | 20 | empty |
| 5 | 128 | 0.45 | 0.77 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8RAH4
- Elsewhere: UniProt Q8RAH4 · AlphaFold DB Q8RAH4
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