Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q63TF9)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q63TF9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q63TF9
- Type
- protein
- Length
- 874 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x083ae04AA11D16e89dd56D68bAFB195324f2F280
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q63TF9
- Pockets
- 11 · best druggability 0.71
Structure
1 distinct chain · 41% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 874 | 41% helix, 26% strand | Q63TF9 |
Pockets
11 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 485 | 0.71 | 0.81 | 52 | empty |
| 2 | 264 | 0.55 | 0.77 | 35 | empty |
| 3 | 198 | 0.48 | 0.76 | 23 | empty |
| 4 | 193 | 0.48 | 0.76 | 25 | empty |
| 5 | 128 | 0.44 | 0.77 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q63TF9
- Elsewhere: UniProt Q63TF9 · AlphaFold DB Q63TF9
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