Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q6FZF1)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q6FZF1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6FZF1
- Type
- protein
- Length
- 888 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x97EfFf2d74994e28D3b69b1503Bd9c292B2Df480
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q6FZF1
- Pockets
- 8 · best druggability 0.74
Structure
1 distinct chain · 42% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 888 | 42% helix, 26% strand | Q6FZF1 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1190 | 0.74 | 0.77 | 88 | empty |
| 2 | 571 | 0.69 | 0.79 | 63 | empty |
| 3 | 198 | 0.49 | 0.76 | 25 | empty |
| 4 | 64 | 0.41 | 0.81 | 17 | empty |
| 5 | 78 | 0.36 | 0.77 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6FZF1
- Elsewhere: UniProt Q6FZF1 · AlphaFold DB Q6FZF1
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