Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q8UE87)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q8UE87) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8UE87
- Type
- protein
- Length
- 887 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB44F19a0cb161828322eEEd13F55d4C3C34938d2
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q8UE87
- Pockets
- 9 · best druggability 0.75
Structure
1 distinct chain · 42% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 887 | 42% helix, 27% strand | Q8UE87 |
Pockets
9 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1119 | 0.75 | 0.78 | 90 | empty |
| 2 | 509 | 0.69 | 0.79 | 48 | empty |
| 3 | 162 | 0.44 | 0.75 | 25 | empty |
| 4 | 59 | 0.39 | 0.80 | 15 | empty |
| 5 | 114 | 0.38 | 0.75 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8UE87
- Elsewhere: UniProt Q8UE87 · AlphaFold DB Q8UE87
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