Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q56273)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase (Q56273) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q56273
- Type
- protein
- Length
- 877 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBbA81fF34F47ba53f6581B08F2f97eb513cf6705
- Molecule
- Alanine--tRNA ligase
- UniProt
- Q56273
- Pockets
- 10 · best druggability 0.69
Structure
1 distinct chain · 43% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase | protein | 877 | 43% helix, 26% strand | Q56273 |
Pockets
10 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 454 | 0.69 | 0.80 | 44 | empty |
| 2 | 413 | 0.60 | 0.76 | 46 | empty |
| 3 | 284 | 0.55 | 0.76 | 28 | empty |
| 4 | 188 | 0.52 | 0.78 | 33 | empty |
| 5 | 154 | 0.50 | 0.79 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q56273
- Elsewhere: UniProt Q56273 · AlphaFold DB Q56273
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