Research workbench
AlphaFold monomer V2.0 prediction for alanine--tRNA ligase, cytoplasmic (Q8BGQ7)
Analyse AlphaFold monomer V2.0 prediction for alanine--tRNA ligase, cytoplasmic (Q8BGQ7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8BGQ7
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d10233e8d7916EAcA13bcc0a521cCa504C4dDE7
- Molecule
- Alanine--tRNA ligase, cytoplasmic
- UniProt
- Q8BGQ7
- Pockets
- 8 · best druggability 0.80
Structure
1 distinct chain · 44% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Alanine--tRNA ligase, cytoplasmic | protein | 968 | 44% helix, 23% strand | Q8BGQ7 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1004 | 0.80 | 0.81 | 109 | empty |
| 2 | 370 | 0.71 | 0.83 | 44 | empty |
| 3 | 123 | 0.52 | 0.81 | 19 | empty |
| 4 | 74 | 0.43 | 0.81 | 20 | empty |
| 5 | 114 | 0.42 | 0.77 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8BGQ7
- Elsewhere: UniProt Q8BGQ7 · AlphaFold DB Q8BGQ7
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