Research workbench
AlphaFold monomer V2.0 prediction for sucrose synthase (Q820M5)
Analyse AlphaFold monomer V2.0 prediction for sucrose synthase (Q820M5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q820M5
- Type
- protein
- Length
- 794 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6dECDC1502b13A35f39b76D366097B55a271cEF0
- Molecule
- Sucrose synthase
- UniProt
- Q820M5
- Pockets
- 8 · best druggability 0.79
Structure
1 distinct chain · 49% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sucrose synthase | protein | 794 | 49% helix, 16% strand | Q820M5 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1198 | 0.79 | 0.81 | 101 | empty |
| 2 | 81 | 0.53 | 0.85 | 17 | empty |
| 3 | 196 | 0.48 | 0.75 | 26 | empty |
| 4 | 149 | 0.45 | 0.76 | 25 | empty |
| 5 | 111 | 0.43 | 0.77 | 24 | empty |
Compared structures
- 4RBN · The crystal structure of Nitrosomonas europaea sucrose synthase: Insights into the… · an experimental structure of the same protein · chain A against A, TM-score 0.97
- 4RBN · The crystal structure of nitrosomonas europaea sucrose synthase: insights into the… · an experimental structure of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q820M5
- Elsewhere: UniProt Q820M5 · AlphaFold DB Q820M5
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