Research workbench
AlphaFold monomer V2.0 prediction for trehalose import ATP-binding protein sugc (P9WQI3)
Analyse AlphaFold monomer V2.0 prediction for trehalose import ATP-binding protein sugc… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P9WQI3
- Type
- protein
- Length
- 393 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9073C46348542FfE4327c3F363F9B51B22058e75
- Molecule
- Trehalose import ATP-binding protein sugc
- UniProt
- P9WQI3
- Pockets
- 4 · best druggability 0.72
Structure
1 distinct chain · 31% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Trehalose import ATP-binding protein sugc | protein | 393 | 31% helix, 31% strand | P9WQI3 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 320 | 0.72 | 0.85 | 30 | empty |
| 2 | 140 | 0.50 | 0.79 | 20 | empty |
| 3 | 122 | 0.44 | 0.77 | 22 | empty |
| 4 | 96 | 0.34 | 0.74 | 14 | empty |
Compared structures
- 8JA7 · Cryo-EM structure of Mycobacterium tuberculosis LpqY-SugABC in complex with trehalose · an experimental structure of the same protein · chain A against C, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P9WQI3
- Elsewhere: UniProt P9WQI3 · AlphaFold DB P9WQI3
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