Research workbench
AlphaFold monomer V2.0 prediction for minor extracellular protease vpr (P29141)
Analyse AlphaFold monomer V2.0 prediction for minor extracellular protease vpr (P29141) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P29141
- Type
- protein
- Length
- 806 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd5893C15C4e51F5F9E3f656556D7c8c8004efeE5
- Molecule
- Minor extracellular protease vpr
- UniProt
- P29141
- Pockets
- 8 · best druggability 0.82
Structure
1 distinct chain · 21% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Minor extracellular protease vpr | protein | 806 | 21% helix, 35% strand | P29141 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1182 | 0.82 | 0.83 | 124 | empty |
| 2 | 360 | 0.54 | 0.74 | 48 | empty |
| 3 | 199 | 0.51 | 0.77 | 32 | empty |
| 4 | 102 | 0.51 | 0.82 | 18 | empty |
| 5 | 67 | 0.45 | 0.81 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29141
- Elsewhere: UniProt P29141 · AlphaFold DB P29141
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.