Research workbench
AlphaFold monomer V2.0 prediction for ATP-dependent RNA helicase SUB2 (Q0CGJ9)
Analyse AlphaFold monomer V2.0 prediction for ATP-dependent RNA helicase SUB2 (Q0CGJ9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0CGJ9
- Type
- protein
- Length
- 438 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1396BAEC28486e9D3C80B83292a35ae454c0a3fa
- Molecule
- ATP-dependent RNA helicase SUB2
- UniProt
- Q0CGJ9
- Pockets
- 5 · best druggability 0.70
Structure
1 distinct chain · 36% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ATP-dependent RNA helicase SUB2 | protein | 438 | 36% helix, 15% strand | Q0CGJ9 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 317 | 0.70 | 0.84 | 50 | empty |
| 2 | 205 | 0.61 | 0.82 | 36 | empty |
| 3 | 122 | 0.46 | 0.78 | 33 | empty |
| 4 | 100 | 0.36 | 0.75 | 18 | empty |
| 5 | 55 | 0.33 | 0.78 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0CGJ9
- Elsewhere: UniProt Q0CGJ9 · AlphaFold DB Q0CGJ9
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