Research workbench
AlphaFold monomer V2.0 prediction for metalloprotease stce (O82882)
Analyse AlphaFold monomer V2.0 prediction for metalloprotease stce (O82882) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O82882
- Type
- protein
- Length
- 898 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2Bf03BE38F2A435a955D7Bb9DA16E9f97c134e4c
- Molecule
- Metalloprotease stce
- UniProt
- O82882
- Pockets
- 7 · best druggability 0.72
Structure
1 distinct chain · 12% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Metalloprotease stce | protein | 898 | 12% helix, 38% strand | O82882 |
Pockets
7 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 690 | 0.72 | 0.78 | 74 | empty |
| 2 | 373 | 0.64 | 0.79 | 36 | empty |
| 3 | 114 | 0.63 | 0.88 | 24 | empty |
| 4 | 90 | 0.59 | 0.87 | 25 | empty |
| 5 | 318 | 0.54 | 0.75 | 34 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 3UJZ · Crystal structure of enterohemorrhagic E. COLI stce · an experimental structure of the same protein · chain A against A, TM-score 0.67
- 3UJZ · Crystal structure of enterohemorrhagic E. coli StcE · an experimental structure of the same protein · chain A against A, TM-score 0.67
- 4DNY · Crystal structure of enterohemorrhagic E. coli StcE(132-251) · an experimental structure of the same protein · chain A against A, TM-score 0.12
- 4DNY · Crystal structure of enterohemorrhagic E. COLI STCE(132-251) · an experimental structure of the same protein · chain A against A, TM-score 0.12
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O82882
- Elsewhere: UniProt O82882 · AlphaFold DB O82882
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