Research workbench
AlphaFold monomer V2.0 prediction for syntaxin-binding protein 5-like (Q5DQR4)
Analyse AlphaFold monomer V2.0 prediction for syntaxin-binding protein 5-like (Q5DQR4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5DQR4
- Type
- protein
- Length
- 1,185 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Syntaxin-binding protein 5-like
- UniProt
- Q5DQR4
- Pockets
- 14 · best druggability 0.87
Structure
1 distinct chain · 11% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Syntaxin-binding protein 5-like | protein | 1185 | 11% helix, 34% strand | Q5DQR4 |
Pockets
14 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1130 | 0.87 | 0.87 | 100 | empty |
| 2 | 1035 | 0.85 | 0.86 | 87 | empty |
| 3 | 519 | 0.64 | 0.76 | 60 | empty |
| 4 | 405 | 0.62 | 0.77 | 37 | empty |
| 5 | 60 | 0.58 | 0.90 | 21 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5DQR4
- Elsewhere: UniProt Q5DQR4 · AlphaFold DB Q5DQR4
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