Research workbench
AlphaFold monomer V2.0 prediction for staga complex 65 subunit gamma (O94864)
Analyse AlphaFold monomer V2.0 prediction for staga complex 65 subunit gamma (O94864) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O94864
- Type
- protein
- Length
- 414 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3298b100681D3A2372Bba3b2f282750dD71629B9
- Molecule
- Staga complex 65 subunit gamma
- UniProt
- O94864
- Pockets
- 4 · best druggability 0.59
Structure
1 distinct chain · 32% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Staga complex 65 subunit gamma | protein | 414 | 32% helix, 0% strand | O94864 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 431 | 0.59 | 0.75 | 35 | empty |
| 2 | 136 | 0.39 | 0.73 | 22 | empty |
| 3 | 119 | 0.38 | 0.74 | 17 | empty |
| 4 | 58 | 0.25 | 0.72 | 13 | empty |
Compared structures
- 7KTS · Negative stain EM structure of the human SAGA coactivator complex (TRRAP, core, splicing… · an experimental structure of the same protein · chain A against D, TM-score 0.47
- 7KTR · Cryo-EM structure of the human saga coactivator complex (trrap, core) · an experimental structure of the same protein · chain A against D, TM-score 0.47
- 7KTR · Cryo-EM structure of the human SAGA coactivator complex (TRRAP, core) · an experimental structure of the same protein · chain A against D, TM-score 0.47
- 8H7G · Cryo-EM structure of the human SAGA complex · an experimental structure of the same protein · chain A against I, TM-score 0.37
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O94864
- Elsewhere: UniProt O94864 · AlphaFold DB O94864
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