Research workbench
AlphaFold monomer V2.0 prediction for sps-sensor serine protease component SSY5 (B5VL29)
Analyse AlphaFold monomer V2.0 prediction for sps-sensor serine protease component SSY5… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5VL29
- Type
- protein
- Length
- 699 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- Sps-sensor serine protease component SSY5
- UniProt
- B5VL29
- Pockets
- 14 · best druggability 0.58
Structure
1 distinct chain · 23% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sps-sensor serine protease component SSY5 | protein | 699 | 23% helix, 19% strand | B5VL29 |
Pockets
14 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 213 | 0.58 | 0.79 | 28 | empty |
| 2 | 179 | 0.57 | 0.80 | 31 | empty |
| 3 | 199 | 0.54 | 0.78 | 35 | empty |
| 4 | 181 | 0.49 | 0.77 | 26 | empty |
| 5 | 75 | 0.46 | 0.83 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5VL29
- Elsewhere: UniProt B5VL29 · AlphaFold DB B5VL29
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