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AlphaFold monomer V2.0 prediction for granule-bound starch synthase 1, CHLOROPLASTIC/AMYLOPLASTIC (Q42968)
Analyse AlphaFold monomer V2.0 prediction for granule-bound starch synthase 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q42968
- Type
- protein
- Length
- 609 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
- Molecule
- Granule-bound starch synthase 1, CHLOROPLASTIC/AMYLOPLASTIC
- UniProt
- Q42968
- Pockets
- 3 · best druggability 0.82
Structure
1 distinct chain · 32% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Granule-bound starch synthase 1, CHLOROPLASTIC/AMYLOPLASTIC | protein | 609 | 32% helix, 17% strand | Q42968 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1175 | 0.82 | 0.83 | 114 | empty |
| 2 | 108 | 0.42 | 0.77 | 22 | empty |
| 3 | 72 | 0.38 | 0.78 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q42968
- Elsewhere: UniProt Q42968 · AlphaFold DB Q42968
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