Research workbench
AlphaFold monomer V2.0 prediction for single-stranded DNA-binding protein, mitochondrial (Q04837)
Analyse AlphaFold monomer V2.0 prediction for single-stranded DNA-binding protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q04837
- Type
- protein
- Length
- 148 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2E07DDd2cabd9424b49B257870F758CE578010E0
- Molecule
- Single-stranded DNA-binding protein, mitochondrial
- UniProt
- Q04837
- Pockets
- 1 · best druggability 0.26
Structure
1 distinct chain · 9% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Single-stranded DNA-binding protein, mitochondrial | protein | 148 | 9% helix, 43% strand | Q04837 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 50 | 0.26 | 0.73 | 14 | empty |
Compared structures
- 6RUP · Human mitochondrial single-stranded DNA binding protein, SSBP1, at 2.1 A resolution… · an experimental structure of the same protein · chain A against A, TM-score 0.69
- 6RUP · Human mitochondrial single-stranded DNA binding protein, SSBP1, at 2.1 a resolution… · an experimental structure of the same protein · chain A against A, TM-score 0.69
- 8UZT · Mitochondrial single-stranded binding protein bound to DNA · an experimental structure of the same protein · chain A against C, TM-score 0.68
- 1S3O · Human mitochondrial single strand DNA binding protein (hmSSB) · an experimental structure of the same protein · chain A against A, TM-score 0.66
- 1S3O · Human mitochondrial single strand DNA binding protein (hmssb) · an experimental structure of the same protein · chain A against A, TM-score 0.66
- 3ULL · Human mitochondrial single-stranded DNA binding protein · an experimental structure of the same protein · chain A against A, TM-score 0.65
- 3ULL · Human mitochondrial single-stranded DNA binding protein · an experimental structure of the same protein · chain A against A, TM-score 0.65
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q04837
- Elsewhere: UniProt Q04837 · AlphaFold DB Q04837
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