Research workbench
AlphaFold monomer V2.0 prediction for serendipity locus protein delta (P07664)
Analyse AlphaFold monomer V2.0 prediction for serendipity locus protein delta (P07664) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P07664
- Type
- protein
- Length
- 433 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb642E6c52E5FE45567aC5188dA34E9680560713E
- Molecule
- Serendipity locus protein delta
- UniProt
- P07664
- Pockets
- 4 · best druggability 0.49
Structure
1 distinct chain · 36% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Serendipity locus protein delta | protein | 433 | 36% helix, 8% strand | P07664 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 96 | 0.49 | 0.81 | 16 | empty |
| 2 | 149 | 0.40 | 0.73 | 24 | empty |
| 3 | 54 | 0.35 | 0.78 | 11 | empty |
| 4 | 78 | 0.31 | 0.73 | 15 | empty |
Compared structures
- 7POH · Crystal structure of zad-domain of serendipity-D protein from D.MELANOGASTER · an experimental structure of the same protein · chain A against B, TM-score 0.20
- 7POH · Crystal structure of ZAD-domain of Serendipity-d protein from D.melanogaster · an experimental structure of the same protein · chain A against B, TM-score 0.20
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P07664
- Elsewhere: UniProt P07664 · AlphaFold DB P07664
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