Research workbench
AlphaFold monomer V2.0 prediction for signal recognition particle subunit SRP68 (Q9VSS2)
Analyse AlphaFold monomer V2.0 prediction for signal recognition particle subunit SRP68… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9VSS2
- Type
- protein
- Length
- 604 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9B130d619fCFc21d0D08E5Ce38Cf42A5fbe230CB
- Molecule
- Signal recognition particle subunit SRP68
- UniProt
- Q9VSS2
- Pockets
- 8 · best druggability 0.54
Structure
1 distinct chain · 59% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Signal recognition particle subunit SRP68 | protein | 604 | 59% helix, 2% strand | Q9VSS2 |
Pockets
8 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 165 | 0.54 | 0.80 | 20 | empty |
| 2 | 169 | 0.48 | 0.76 | 29 | empty |
| 3 | 136 | 0.41 | 0.75 | 24 | empty |
| 4 | 95 | 0.40 | 0.76 | 17 | empty |
| 5 | 73 | 0.33 | 0.75 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9VSS2
- Elsewhere: UniProt Q9VSS2 · AlphaFold DB Q9VSS2
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