Research workbench
AlphaFold monomer V2.0 prediction for sarcalumenin (P13666)
Analyse AlphaFold monomer V2.0 prediction for sarcalumenin (P13666) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P13666
- Type
- protein
- Length
- 472 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x21E6a6CC4CEAAD06549B321F45929D5160271b8E
- Molecule
- Sarcalumenin
- UniProt
- P13666
- Pockets
- 5 · best druggability 0.62
Structure
1 distinct chain · 49% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sarcalumenin | protein | 472 | 49% helix, 10% strand | P13666 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 298 | 0.62 | 0.79 | 41 | empty |
| 2 | 280 | 0.51 | 0.74 | 27 | empty |
| 3 | 129 | 0.44 | 0.77 | 25 | empty |
| 4 | 71 | 0.44 | 0.82 | 20 | empty |
| 5 | 61 | 0.34 | 0.77 | 13 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P13666
- Elsewhere: UniProt P13666 · AlphaFold DB P13666
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