Research workbench
AlphaFold monomer V2.0 prediction for sarcalumenin (Q90577)
Analyse AlphaFold monomer V2.0 prediction for sarcalumenin (Q90577) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q90577
- Type
- protein
- Length
- 472 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x78Cc7f9BF18AF8279e492D45EE7Fe9d7cC6f6D07
- Molecule
- Sarcalumenin
- UniProt
- Q90577
- Pockets
- 5 · best druggability 0.62
Structure
1 distinct chain · 47% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sarcalumenin | protein | 472 | 47% helix, 10% strand | Q90577 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 361 | 0.62 | 0.78 | 43 | empty |
| 2 | 51 | 0.49 | 0.87 | 19 | empty |
| 3 | 115 | 0.46 | 0.79 | 22 | empty |
| 4 | 120 | 0.38 | 0.74 | 19 | empty |
| 5 | 64 | 0.34 | 0.76 | 17 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q90577
- Elsewhere: UniProt Q90577 · AlphaFold DB Q90577
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