Research workbench
AlphaFold monomer V2.0 prediction for S1 RNA-binding domain- containing protein 1 (Q8N5C6)
Analyse AlphaFold monomer V2.0 prediction for S1 RNA-binding domain- containing protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8N5C6
- Type
- protein
- Length
- 995 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x79a905d858Ce72991FD6E7a9C6498620f42E146D
- Molecule
- S1 RNA-binding domain-containing protein 1
- UniProt
- Q8N5C6
- Pockets
- 13 · best druggability 0.73
Structure
1 distinct chain · 42% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | S1 RNA-binding domain-containing protein 1 | protein | 995 | 42% helix, 9% strand | Q8N5C6 |
Pockets
13 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 376 | 0.73 | 0.84 | 42 | empty |
| 2 | 526 | 0.70 | 0.80 | 53 | empty |
| 3 | 574 | 0.64 | 0.75 | 62 | empty |
| 4 | 458 | 0.61 | 0.76 | 42 | empty |
| 5 | 187 | 0.47 | 0.75 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8N5C6
- Elsewhere: UniProt Q8N5C6 · AlphaFold DB Q8N5C6
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