Research workbench
AlphaFold monomer V2.0 prediction for signal recognition particle 43 kda protein, chloroplastic (O22265)
Analyse AlphaFold monomer V2.0 prediction for signal recognition particle 43 kda… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O22265
- Type
- protein
- Length
- 373 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xDbB2f4f08BfF33e6E02Dc57ac14F6FA31fCF4899
- Molecule
- Signal recognition particle 43 kda protein, chloroplastic
- UniProt
- O22265
- Pockets
- 2 · best druggability 0.43
Structure
1 distinct chain · 32% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Signal recognition particle 43 kda protein, chloroplastic | protein | 373 | 32% helix, 20% strand | O22265 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 156 | 0.43 | 0.74 | 18 | empty |
| 2 | 143 | 0.41 | 0.74 | 26 | empty |
Compared structures
- 3UI2 · Crystal structure of the CPSRP54 tail bound to CPSRP43 · an experimental structure of the same protein · chain A against A, TM-score 0.60
- 3UI2 · Crystal structure of the cpSRP54 tail bound to cpSRP43 · an experimental structure of the same protein · chain A against A, TM-score 0.60
- 3DEP · Structural basis for specific substrate recognition by the chloroplast signal recognition… · an experimental structure of the same protein · chain A against A, TM-score 0.48
- 3DEP · Structural basis for specific substrate recognition by the chloroplast signal recognition… · an experimental structure of the same protein · chain A against A, TM-score 0.48
- 3DEO · Structural basis for specific substrate recognition by the chloroplast signal recognition… · an experimental structure of the same protein · chain A against A, TM-score 0.48
- 3DEO · Structural basis for specific substrate recognition by the chloroplast signal recognition… · an experimental structure of the same protein · chain A against A, TM-score 0.48
- 5E4W · Crystal structure of CPSRP43 chromodomains 2 and 3 in complex with the ALB3 tail · an experimental structure of the same protein · chain A against C, TM-score 0.27
- 5E4W · Crystal structure of cpSRP43 chromodomains 2 and 3 in complex with the Alb3 tail · an experimental structure of the same protein · chain A against C, TM-score 0.27
- 2N88 · Chromodomain 3 (CD3) of cpSRP43 · an experimental structure of the same protein · chain A against A, TM-score 0.14
- 2N88 · Chromodomain 3 (CD3) of CPSRP43 · an experimental structure of the same protein · chain A against A, TM-score 0.14
- 1X3P · 3D solution structure of the chromo-3 domain of CPSRP43 · an experimental structure of the same protein · chain A against A, TM-score 0.10
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O22265
- Elsewhere: UniProt O22265 · AlphaFold DB O22265
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