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AlphaFold monomer V2.0 prediction for signal recognition particle 43 kda protein, chloroplastic (O22265)

Analyse AlphaFold monomer V2.0 prediction for signal recognition particle 43 kda… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession
O22265
Type
protein
Length
373 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0xDbB2f4f08BfF33e6E02Dc57ac14F6FA31fCF4899
Molecule
Signal recognition particle 43 kda protein, chloroplastic
UniProt
O22265
Pockets
2 · best druggability 0.43

Structure

1 distinct chain · 32% helix, 20% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASignal recognition particle 43 kda protein, chloroplasticprotein37332% helix, 20% strandO22265

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11560.430.7418empty
21430.410.7426empty

Compared structures

  • 3UI2 · Crystal structure of the CPSRP54 tail bound to CPSRP43 · an experimental structure of the same protein · chain A against A, TM-score 0.60
  • 3UI2 · Crystal structure of the cpSRP54 tail bound to cpSRP43 · an experimental structure of the same protein · chain A against A, TM-score 0.60
  • 3DEP · Structural basis for specific substrate recognition by the chloroplast signal recognition… · an experimental structure of the same protein · chain A against A, TM-score 0.48
  • 3DEP · Structural basis for specific substrate recognition by the chloroplast signal recognition… · an experimental structure of the same protein · chain A against A, TM-score 0.48
  • 3DEO · Structural basis for specific substrate recognition by the chloroplast signal recognition… · an experimental structure of the same protein · chain A against A, TM-score 0.48
  • 3DEO · Structural basis for specific substrate recognition by the chloroplast signal recognition… · an experimental structure of the same protein · chain A against A, TM-score 0.48
  • 5E4W · Crystal structure of CPSRP43 chromodomains 2 and 3 in complex with the ALB3 tail · an experimental structure of the same protein · chain A against C, TM-score 0.27
  • 5E4W · Crystal structure of cpSRP43 chromodomains 2 and 3 in complex with the Alb3 tail · an experimental structure of the same protein · chain A against C, TM-score 0.27
  • 2N88 · Chromodomain 3 (CD3) of cpSRP43 · an experimental structure of the same protein · chain A against A, TM-score 0.14
  • 2N88 · Chromodomain 3 (CD3) of CPSRP43 · an experimental structure of the same protein · chain A against A, TM-score 0.14
  • 1X3P · 3D solution structure of the chromo-3 domain of CPSRP43 · an experimental structure of the same protein · chain A against A, TM-score 0.10

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