Research workbench
AlphaFold monomer V2.0 prediction for probable udp-N- acetylglucosamine--peptide N-acetylglucosaminyltransferase spindly (Q6YZI0)
Analyse AlphaFold monomer V2.0 prediction for probable udp-N… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6YZI0
- Type
- protein
- Length
- 927 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8841A75A4374915eB1e3A60827149042327e3c89
- Molecule
- Probable udp-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase spindly
- UniProt
- Q6YZI0
- Pockets
- 5 · best druggability 0.75
Structure
1 distinct chain · 58% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable udp-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase spindly | protein | 927 | 58% helix, 6% strand | Q6YZI0 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1094 | 0.75 | 0.78 | 79 | empty |
| 2 | 790 | 0.69 | 0.76 | 82 | empty |
| 3 | 84 | 0.46 | 0.81 | 16 | empty |
| 4 | 88 | 0.46 | 0.80 | 15 | empty |
| 5 | 52 | 0.32 | 0.77 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6YZI0
- Elsewhere: UniProt Q6YZI0 · AlphaFold DB Q6YZI0
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