Research workbench
AlphaFold monomer V2.0 prediction for transcription elongation factor SPT5 (Q5R405)
Analyse AlphaFold monomer V2.0 prediction for transcription elongation factor SPT5… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5R405
- Type
- protein
- Length
- 1,083 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4Ef77Afb5a3D9F41c95Be3227D1CC986CCb61835
- Molecule
- Transcription elongation factor SPT5
- UniProt
- Q5R405
- Pockets
- 4 · best druggability 0.62
Structure
1 distinct chain · 10% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcription elongation factor SPT5 | protein | 1083 | 10% helix, 22% strand | Q5R405 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 575 | 0.62 | 0.74 | 50 | empty |
| 2 | 118 | 0.54 | 0.83 | 26 | empty |
| 3 | 164 | 0.44 | 0.74 | 23 | empty |
| 4 | 52 | 0.31 | 0.76 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5R405
- Elsewhere: UniProt Q5R405 · AlphaFold DB Q5R405
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