Research workbench
AlphaFold monomer V2.0 prediction for serine protease sppa, chloroplastic (Q9C9C0)
Analyse AlphaFold monomer V2.0 prediction for serine protease sppa, chloroplastic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9C9C0
- Type
- protein
- Length
- 677 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- Serine protease sppa, chloroplastic
- UniProt
- Q9C9C0
- Pockets
- 7 · best druggability 0.78
Structure
1 distinct chain · 39% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Serine protease sppa, chloroplastic | protein | 677 | 39% helix, 17% strand | Q9C9C0 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1199 | 0.78 | 0.80 | 113 | empty |
| 2 | 808 | 0.77 | 0.81 | 68 | empty |
| 3 | 222 | 0.48 | 0.75 | 31 | empty |
| 4 | 168 | 0.43 | 0.74 | 22 | empty |
| 5 | 61 | 0.38 | 0.79 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9C9C0
- Elsewhere: UniProt Q9C9C0 · AlphaFold DB Q9C9C0
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