Research workbench
AlphaFold monomer V2.0 prediction for streptopain (P0DD39)
Analyse AlphaFold monomer V2.0 prediction for streptopain (P0DD39) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0DD39
- Type
- protein
- Length
- 398 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
- Molecule
- Streptopain
- UniProt
- P0DD39
- Pockets
- 3 · best druggability 0.50
Structure
1 distinct chain · 29% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Streptopain | protein | 398 | 29% helix, 18% strand | P0DD39 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 228 | 0.50 | 0.75 | 39 | empty |
| 2 | 80 | 0.47 | 0.82 | 20 | empty |
| 3 | 116 | 0.43 | 0.77 | 29 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DD39
- Elsewhere: UniProt P0DD39 · AlphaFold DB P0DD39
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