Research workbench
AlphaFold monomer V2.0 prediction for spermatogenesis-defective protein 39 homolog (Q5PQN6)
Analyse AlphaFold monomer V2.0 prediction for spermatogenesis-defective protein 39… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5PQN6
- Type
- protein
- Length
- 460 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71112d4fF7ebb3b617963c05f052289e073082FD
- Molecule
- Spermatogenesis-defective protein 39 homolog
- UniProt
- Q5PQN6
- Pockets
- 5 · best druggability 0.59
Structure
1 distinct chain · 51% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Spermatogenesis-defective protein 39 homolog | protein | 460 | 51% helix, 1% strand | Q5PQN6 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 293 | 0.59 | 0.78 | 38 | empty |
| 2 | 315 | 0.55 | 0.75 | 32 | empty |
| 3 | 164 | 0.45 | 0.75 | 21 | empty |
| 4 | 170 | 0.41 | 0.72 | 17 | empty |
| 5 | 99 | 0.40 | 0.76 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5PQN6
- Elsewhere: UniProt Q5PQN6 · AlphaFold DB Q5PQN6
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