Research workbench
AlphaFold monomer V2.0 prediction for ATP-dependent rRNA helicase SPB4 (Q0UP45)
Analyse AlphaFold monomer V2.0 prediction for ATP-dependent rRNA helicase SPB4 (Q0UP45) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0UP45
- Type
- protein
- Length
- 633 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x16ABDdce0887F91E816081FB1f19F9F016a5f311
- Molecule
- ATP-dependent rRNA helicase SPB4
- UniProt
- Q0UP45
- Pockets
- 9 · best druggability 0.64
Structure
1 distinct chain · 47% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ATP-dependent rRNA helicase SPB4 | protein | 633 | 47% helix, 12% strand | Q0UP45 |
Pockets
9 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 179 | 0.64 | 0.85 | 35 | empty |
| 2 | 514 | 0.62 | 0.75 | 46 | empty |
| 3 | 186 | 0.58 | 0.81 | 33 | empty |
| 4 | 282 | 0.56 | 0.77 | 36 | empty |
| 5 | 176 | 0.41 | 0.73 | 32 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0UP45
- Elsewhere: UniProt Q0UP45 · AlphaFold DB Q0UP45
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