Research workbench
AlphaFold monomer V2.0 prediction for ATP-dependent rRNA helicase SPB4 (A5E2I8)
Analyse AlphaFold monomer V2.0 prediction for ATP-dependent rRNA helicase SPB4 (A5E2I8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5E2I8
- Type
- protein
- Length
- 637 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7FDF8b382C6a36A8772D1A265E8e480c7DF0A9C1
- Molecule
- ATP-dependent rRNA helicase SPB4
- UniProt
- A5E2I8
- Pockets
- 10 · best druggability 0.70
Structure
1 distinct chain · 47% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ATP-dependent rRNA helicase SPB4 | protein | 637 | 47% helix, 12% strand | A5E2I8 |
Pockets
10 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 593 | 0.70 | 0.78 | 60 | empty |
| 2 | 112 | 0.48 | 0.80 | 21 | empty |
| 3 | 120 | 0.42 | 0.76 | 26 | empty |
| 4 | 70 | 0.37 | 0.78 | 13 | empty |
| 5 | 72 | 0.35 | 0.76 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5E2I8
- Elsewhere: UniProt A5E2I8 · AlphaFold DB A5E2I8
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