Research workbench
AlphaFold monomer V2.0 prediction for ATP-dependent rRNA helicase SPB4 (Q4HVW2)
Analyse AlphaFold monomer V2.0 prediction for ATP-dependent rRNA helicase SPB4 (Q4HVW2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q4HVW2
- Type
- protein
- Length
- 637 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x808E7f2446Bf50908aD112C70afD6E2e27bFd57D
- Molecule
- ATP-dependent rRNA helicase SPB4
- UniProt
- Q4HVW2
- Pockets
- 7 · best druggability 0.70
Structure
1 distinct chain · 48% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ATP-dependent rRNA helicase SPB4 | protein | 637 | 48% helix, 12% strand | Q4HVW2 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 665 | 0.70 | 0.78 | 75 | empty |
| 2 | 162 | 0.61 | 0.84 | 29 | empty |
| 3 | 50 | 0.41 | 0.82 | 16 | empty |
| 4 | 143 | 0.41 | 0.74 | 31 | empty |
| 5 | 82 | 0.35 | 0.75 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4HVW2
- Elsewhere: UniProt Q4HVW2 · AlphaFold DB Q4HVW2
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