Research workbench
AlphaFold monomer V2.0 prediction for ATP-dependent rRNA helicase SPB4 (P0CR08)
Analyse AlphaFold monomer V2.0 prediction for ATP-dependent rRNA helicase SPB4 (P0CR08) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0CR08
- Type
- protein
- Length
- 748 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdF2b063d4B94F3f46D117B1af99A846bD4a59284
- Molecule
- ATP-dependent rRNA helicase SPB4
- UniProt
- P0CR08
- Pockets
- 9 · best druggability 0.71
Structure
1 distinct chain · 48% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ATP-dependent rRNA helicase SPB4 | protein | 748 | 48% helix, 11% strand | P0CR08 |
Pockets
9 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 54 | 0.71 | 0.98 | 18 | empty |
| 2 | 495 | 0.69 | 0.79 | 53 | empty |
| 3 | 359 | 0.60 | 0.77 | 34 | empty |
| 4 | 69 | 0.55 | 0.87 | 24 | empty |
| 5 | 190 | 0.51 | 0.77 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0CR08
- Elsewhere: UniProt P0CR08 · AlphaFold DB P0CR08
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