Research workbench
AlphaFold monomer V2.0 prediction for VPS10 domain-containing receptor SORCS3 (Q9UPU3)
Analyse AlphaFold monomer V2.0 prediction for VPS10 domain-containing receptor SORCS3… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9UPU3
- Type
- protein
- Length
- 1,222 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x661f92Fc5950020C7aB410B5F5b9a3f429F49Ae5
- Molecule
- VPS10 domain-containing receptor SORCS3
- UniProt
- Q9UPU3
- Pockets
- 14 · best druggability 0.84
Structure
1 distinct chain · 8% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | VPS10 domain-containing receptor SORCS3 | protein | 1222 | 8% helix, 36% strand | Q9UPU3 |
Pockets
14 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 756 | 0.84 | 0.87 | 100 | empty |
| 2 | 682 | 0.67 | 0.76 | 70 | empty |
| 3 | 110 | 0.62 | 0.87 | 30 | empty |
| 4 | 533 | 0.62 | 0.75 | 57 | empty |
| 5 | 123 | 0.62 | 0.86 | 31 | empty |
Modifications
Observed in the structure: 7 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UPU3
- Elsewhere: UniProt Q9UPU3 · AlphaFold DB Q9UPU3
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