Research workbench
AlphaFold monomer V2.0 prediction for dorsal-ventral patterning protein sog (Q24025)
Analyse AlphaFold monomer V2.0 prediction for dorsal-ventral patterning protein sog… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q24025
- Type
- protein
- Length
- 1,038 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- Dorsal-ventral patterning protein sog
- UniProt
- Q24025
- Pockets
- 12 · best druggability 0.83
Structure
1 distinct chain · 12% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Dorsal-ventral patterning protein sog | protein | 1038 | 12% helix, 34% strand | Q24025 |
Pockets
12 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 998 | 0.83 | 0.84 | 83 | empty |
| 2 | 210 | 0.58 | 0.80 | 36 | empty |
| 3 | 201 | 0.55 | 0.79 | 29 | empty |
| 4 | 165 | 0.52 | 0.78 | 16 | empty |
| 5 | 86 | 0.48 | 0.82 | 15 | empty |
Modifications
Observed in the structure: 22 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q24025
- Elsewhere: UniProt Q24025 · AlphaFold DB Q24025
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