Research workbench
AlphaFold monomer V2.0 prediction for superoxide dismutase [fe] 1, chloroplastic (Q5VRL3)
Analyse AlphaFold monomer V2.0 prediction for superoxide dismutase [fe] 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5VRL3
- Type
- protein
- Length
- 391 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf87a97E0A4bB354D834857B14296240B167cbe70
- Molecule
- Superoxide dismutase [fe] 1, chloroplastic
- UniProt
- Q5VRL3
- Pockets
- 4 · best druggability 0.67
Structure
1 distinct chain · 38% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Superoxide dismutase [fe] 1, chloroplastic | protein | 391 | 38% helix, 6% strand | Q5VRL3 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 188 | 0.67 | 0.86 | 31 | empty |
| 2 | 52 | 0.40 | 0.81 | 15 | empty |
| 3 | 68 | 0.35 | 0.77 | 17 | empty |
| 4 | 61 | 0.33 | 0.76 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5VRL3
- Elsewhere: UniProt Q5VRL3 · AlphaFold DB Q5VRL3
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