Research workbench
AlphaFold monomer V2.0 prediction for sialoadhesin (Q9BZZ2)
Analyse AlphaFold monomer V2.0 prediction for sialoadhesin (Q9BZZ2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9BZZ2
- Type
- protein
- Length
- 1,709 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3e5a37E480b8dCe8027d16fD44855E730531Fc50
- Molecule
- Sialoadhesin
- UniProt
- Q9BZZ2
- Pockets
- 17 · best druggability 0.75
Structure
1 distinct chain · 5% helix, 51% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sialoadhesin | protein | 1709 | 5% helix, 51% strand | Q9BZZ2 |
Pockets
17 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1028 | 0.75 | 0.78 | 92 | empty |
| 2 | 1043 | 0.69 | 0.74 | 77 | empty |
| 3 | 295 | 0.57 | 0.76 | 39 | empty |
| 4 | 151 | 0.55 | 0.81 | 30 | empty |
| 5 | 153 | 0.51 | 0.79 | 26 | empty |
Modifications
Observed in the structure: 18 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9BZZ2
- Elsewhere: UniProt Q9BZZ2 · AlphaFold DB Q9BZZ2
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