Research workbench
AlphaFold monomer V2.0 prediction for sorting nexin-41 (O60107)
Analyse AlphaFold monomer V2.0 prediction for sorting nexin-41 (O60107) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O60107
- Type
- protein
- Length
- 586 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- Sorting nexin-41
- UniProt
- O60107
- Pockets
- 8 · best druggability 0.57
Structure
1 distinct chain · 54% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sorting nexin-41 | protein | 586 | 54% helix, 4% strand | O60107 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 167 | 0.57 | 0.82 | 27 | empty |
| 2 | 81 | 0.57 | 0.87 | 23 | empty |
| 3 | 241 | 0.50 | 0.75 | 32 | empty |
| 4 | 124 | 0.40 | 0.75 | 21 | empty |
| 5 | 101 | 0.33 | 0.73 | 17 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O60107
- Elsewhere: UniProt O60107 · AlphaFold DB O60107
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