Research workbench
AlphaFold monomer V2.0 prediction for sorting nexin-16 (P57768)
Analyse AlphaFold monomer V2.0 prediction for sorting nexin-16 (P57768) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P57768
- Type
- protein
- Length
- 344 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- Sorting nexin-16
- UniProt
- P57768
- Pockets
- 3 · best druggability 0.54
Structure
1 distinct chain · 29% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sorting nexin-16 | protein | 344 | 29% helix, 7% strand | P57768 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 302 | 0.54 | 0.75 | 26 | empty |
| 2 | 114 | 0.44 | 0.77 | 12 | empty |
| 3 | 78 | 0.42 | 0.79 | 19 | empty |
Compared structures
- 5GW1 · Crystal structure of SNX16 px-coiled coil in space group P212121 · an experimental structure of the same protein · chain A against A, TM-score 0.39
- 5GW0 · Crystal structure of SNX16 PX-Coiled coil · an experimental structure of the same protein · chain A against D, TM-score 0.38
- 5GW0 · Crystal structure of SNX16 px-coiled coil · an experimental structure of the same protein · chain A against D, TM-score 0.38
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P57768
- Elsewhere: UniProt P57768 · AlphaFold DB P57768
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