Research workbench

AlphaFold monomer V2.0 prediction for gamma-2-syntrophin (Q9NY99)

Analyse AlphaFold monomer V2.0 prediction for gamma-2-syntrophin (Q9NY99) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q9NY99
Type: protein
Length: 539 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x8d96d6Ee1CD7B2e188d9779006d86D77205A1292
Molecule: Gamma-2-syntrophin
UniProt: Q9NY99
Pockets: 8 · best druggability 0.72

Structure

1 distinct chain · 23% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Gamma-2-syntrophin	protein	539	23% helix, 34% strand	Q9NY99

Pockets

8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	359	0.72	0.84	48	empty
2	604	0.70	0.78	40	empty
3	121	0.54	0.82	21	empty
4	130	0.50	0.79	19	empty
5	84	0.49	0.83	19	empty

Compared structures

7QQL · The PDZ domain of SNTG2 complexed with the phosphorylated PDZ-binding motif of RSK1 · an experimental structure of the same protein · chain A against C, TM-score 0.22
7QQL · The PDZ domain of SNTG2 complexed with the phosphorylated PDZ-binding motif of RSK1 · an experimental structure of the same protein · chain A against C, TM-score 0.22

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9NY99
Elsewhere: UniProt Q9NY99 · AlphaFold DB Q9NY99

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.