Research workbench
AlphaFold monomer V2.0 prediction for sensory neuron membrane protein 1 (B4R136)
Analyse AlphaFold monomer V2.0 prediction for sensory neuron membrane protein 1 (B4R136) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4R136
- Type
- protein
- Length
- 551 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB44F19a0cb161828322eEEd13F55d4C3C34938d2
- Molecule
- Sensory neuron membrane protein 1
- UniProt
- B4R136
- Pockets
- 5 · best druggability 0.88
Structure
1 distinct chain · 31% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sensory neuron membrane protein 1 | protein | 551 | 31% helix, 27% strand | B4R136 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1186 | 0.88 | 0.88 | 112 | empty |
| 2 | 130 | 0.43 | 0.76 | 20 | empty |
| 3 | 136 | 0.41 | 0.75 | 27 | empty |
| 4 | 81 | 0.39 | 0.77 | 15 | empty |
| 5 | 54 | 0.26 | 0.73 | 15 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4R136
- Elsewhere: UniProt B4R136 · AlphaFold DB B4R136
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