Research workbench
AlphaFold monomer V2.0 prediction for sensory neuron membrane protein 1 (Q9VDD3)
Analyse AlphaFold monomer V2.0 prediction for sensory neuron membrane protein 1 (Q9VDD3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9VDD3
- Type
- protein
- Length
- 551 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- Sensory neuron membrane protein 1
- UniProt
- Q9VDD3
- Pockets
- 4 · best druggability 0.87
Structure
1 distinct chain · 32% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sensory neuron membrane protein 1 | protein | 551 | 32% helix, 28% strand | Q9VDD3 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1174 | 0.87 | 0.88 | 110 | empty |
| 2 | 145 | 0.42 | 0.75 | 26 | empty |
| 3 | 114 | 0.41 | 0.76 | 23 | empty |
| 4 | 77 | 0.37 | 0.76 | 14 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9VDD3
- Elsewhere: UniProt Q9VDD3 · AlphaFold DB Q9VDD3
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.