Research workbench
AlphaFold monomer V2.0 prediction for sushi, nidogen and EGF-like domain-containing protein 1 (Q70E20)
Analyse AlphaFold monomer V2.0 prediction for sushi, nidogen and EGF-like… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q70E20
- Type
- protein
- Length
- 1,403 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x35612D34a32C306CA4fc1edA9360D1F717e25950
- Molecule
- Sushi, nidogen and EGF-like domain-containing protein 1
- UniProt
- Q70E20
- Pockets
- 5 · best druggability 0.77
Structure
1 distinct chain · 6% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sushi, nidogen and EGF-like domain-containing protein 1 | protein | 1403 | 6% helix, 37% strand | Q70E20 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 787 | 0.77 | 0.81 | 85 | empty |
| 2 | 411 | 0.59 | 0.75 | 43 | empty |
| 3 | 83 | 0.48 | 0.82 | 16 | empty |
| 4 | 98 | 0.41 | 0.77 | 15 | empty |
| 5 | 72 | 0.39 | 0.78 | 16 | empty |
Modifications
Observed in the structure: 51 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q70E20
- Elsewhere: UniProt Q70E20 · AlphaFold DB Q70E20
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