Research workbench
AlphaFold monomer V2.0 prediction for staphylococcal nuclease domain- containing protein 1 (Q9Y7U7)
Analyse AlphaFold monomer V2.0 prediction for staphylococcal nuclease domain… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9Y7U7
- Type
- protein
- Length
- 878 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4Ef77Afb5a3D9F41c95Be3227D1CC986CCb61835
- Molecule
- Staphylococcal nuclease domain-containing protein 1
- UniProt
- Q9Y7U7
- Pockets
- 7 · best druggability 0.62
Structure
1 distinct chain · 28% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Staphylococcal nuclease domain-containing protein 1 | protein | 878 | 28% helix, 30% strand | Q9Y7U7 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 526 | 0.62 | 0.75 | 59 | empty |
| 2 | 182 | 0.60 | 0.82 | 30 | empty |
| 3 | 191 | 0.49 | 0.76 | 29 | empty |
| 4 | 56 | 0.34 | 0.78 | 12 | empty |
| 5 | 64 | 0.30 | 0.75 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y7U7
- Elsewhere: UniProt Q9Y7U7 · AlphaFold DB Q9Y7U7
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