Research workbench
AlphaFold monomer V2.0 prediction for ribosome-inactivating protein snai (Q41358)
Analyse AlphaFold monomer V2.0 prediction for ribosome-inactivating protein snai… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q41358
- Type
- protein
- Length
- 570 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6d258c29D80b821963E51A344827d133821D228B
- Molecule
- Ribosome-inactivating protein snai
- UniProt
- Q41358
- Pockets
- 4 · best druggability 0.72
Structure
1 distinct chain · 28% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosome-inactivating protein snai | protein | 570 | 28% helix, 27% strand | Q41358 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 432 | 0.72 | 0.82 | 66 | empty |
| 2 | 206 | 0.55 | 0.79 | 37 | empty |
| 3 | 187 | 0.46 | 0.75 | 27 | empty |
| 4 | 115 | 0.45 | 0.78 | 28 | empty |
Modifications
Observed in the structure: 5 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q41358
- Elsewhere: UniProt Q41358 · AlphaFold DB Q41358
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