Research workbench
AlphaFold monomer V2.0 prediction for set and mynd domain-containing protein 4 (Q8IYR2)
Analyse AlphaFold monomer V2.0 prediction for set and mynd domain-containing protein 4… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8IYR2
- Type
- protein
- Length
- 804 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7c75F0f7d6d136A2b8D4C6C6e9b3D8a697949DF1
- Molecule
- Set and mynd domain-containing protein 4
- UniProt
- Q8IYR2
- Pockets
- 12 · best druggability 0.81
Structure
1 distinct chain · 52% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Set and mynd domain-containing protein 4 | protein | 804 | 52% helix, 10% strand | Q8IYR2 |
Pockets
12 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 950 | 0.81 | 0.83 | 99 | empty |
| 2 | 212 | 0.79 | 0.93 | 33 | empty |
| 3 | 384 | 0.69 | 0.81 | 37 | empty |
| 4 | 119 | 0.59 | 0.85 | 37 | empty |
| 5 | 244 | 0.50 | 0.74 | 33 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8IYR2
- Elsewhere: UniProt Q8IYR2 · AlphaFold DB Q8IYR2
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