Research workbench
AlphaFold monomer V2.0 prediction for small aggregate formation protein (P54661)
Analyse AlphaFold monomer V2.0 prediction for small aggregate formation protein (P54661) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P54661
- Type
- protein
- Length
- 283 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xccE07Bb1cCcAb5FcC2f1c06b35F43BCa615b5bC8
- Molecule
- Small aggregate formation protein
- UniProt
- P54661
- Pockets
- 2 · best druggability 0.47
Structure
1 distinct chain · 27% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Small aggregate formation protein | protein | 283 | 27% helix, 38% strand | P54661 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 178 | 0.47 | 0.75 | 26 | empty |
| 2 | 89 | 0.34 | 0.74 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P54661
- Elsewhere: UniProt P54661 · AlphaFold DB P54661
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